Sign in →

Test Code LAB2971 DCM/LVNC Panel

Additional Codes

DCM/LVNC Pnl

Clinical System Name

DCM/LVNC Panel

Synonyms

DCM/LVNC Gene Panel

Dilated Cardiomyopathy (DCM)

Left Ventricular Noncompaction (LVNC)

Sample Requirements

Preferred Specimen: Whole Blood

Container(s): Lavender/EDTA

Preferred Vol: 5.0 mL

Minimum Vol: 2.0 mL (1.0 mL is acceptable for infants)

 

Alternative Specimen: DNA

Container(s): Sterile Plastic Tube

Preferred Vol: 5 µg at a concentration of ≥50 ng/µL AND a volume of ≥100 µL

 

Alternative Specimen: Buccal Swab

 

Processing Instructions

Reject due to:

Spin: N

Aliquot: N

Temp: 2 - 4 C

Storage location: Refrigerate in CPA refrigerator Send Outs rack. Samples drawn on a Friday can be refrigerated until Monday shipment. Samples drawn on a Friday before a Monday holiday must have DNA extraction.

 

Off-site collection: Send whole blood refrigerated.

Stability

Specimen Type Temperature Time
Whole Blood Room temp 3 d
Whole Blood Refrigerated 7 d
Whole Blood Frozen N
Extracted DNA Room temp 3-4 d
Extracted DNA Refrigerated 1 y
Extracted DNA Frozen Indefinitely

 

Availability

STAT Performed TAT
N   4 w

 

Performing Laboratory

GeneDx

207 Perry Parkway

Gaithersburg, MD 20877


Phone Number: (301) 519-2100

Department

Department: Send Outs/Genetic

Phone Number: (206) 987-2563

Methodology

Method: Next-generation sequencing with CNV calling (NGS-CNV)

 

The technical sensitivity of sequencing is estimated to be >99% at detecting single nucleotide events. It will not reliably detect deletions greater than 20 base pairs, insertions or rearrangements greater than 10 base pairs, or low-level mosaicism.

 

For TTN, sequencing of exons 1-171 and 199-363 only. The copy number assessment methods used with this test cannot reliably detect copy number variants of less than 500 base pairs or mosaicism and cannot identify balanced chromosome aberrations. Assessment of exon-level copy number events is dependent on the inherent sequence properties of the targeted regions, including shared homology and exon size. Gene specific exclusions for exon-level deletion/duplication testing for this panel are: mitochondrial gene(s), no copy number testing; ALMS1, EMD, HCN4, and TBX20 genes only whole gene deletions or duplications may be detected. SCN5A gene, exon level coverage for exons 2-12 and 21-28 only.

 

For mitochondrial gene testing, next-generation sequencing may not detect mtDNA point variants present at 10% heteroplasmy or lower. 

Reference Range

Interpretive report is provided

Send Out Instructions

Reference Test Name:

Dilated Cardiomyopathy Panel

Reference Lab Test Code: J554
Instructions: Ship via FedEx Priority Overnight. Saturday deliveries are accepted.

 

Description

This panel includes analysis of genes assocaited with Dilated cardiomyopathy (DCM) and Left ventricular noncompaction (LVNC).

 

This panel includes genes: ABCC9, ACTC1, ACTN2, ALMS1, ANKRD1, BAG3, CHRM2, CRYAB, CSRP3, DES, DMD, DOLK, DSC2, DSG2, DSP, DTNA, EMD, FKTN, FLNC, GATAD1, HCN4, ILK, LAMA4, LAMP2, LDB3, LMNA, LRRC10, MIB1, MTND1, MTND5, MTND6, MTTD, MTTG, MTTH, MTTI, MTTK, MTTL1, MTTL2, MTTM, MTTQ, MTTS1, MTTS2, MYBPC3, MYH6, MYH7, MYPN, NEBL, NEXN, NKX2-5, PLN, PRDM16, RAF1, RBM20, RYR2, SCN5A, SGCD, TAZ, TBX20, TCAP, TMPO, TNNC1, TNNI3, TNNT2, TPM1, TTN, TTR, TXNRD2, VCL

Special Instructions

Requisition 

GeneDx

Test Info Sheet

Clinical Utility

Dilated cardiomyopathy (DCM) is a disease of the heart muscle that is diagnosed based on the findings of both left ventricular enlargement and systolic dysfunction, resulting in a reduction in the myocardial force of contraction. This condition is primarily determined by echocardiogram to measure cardiac chamber dimensions, ventricular thickness, and ejection fraction. DCM usually presents with one or more of the following; i) heart failure with symptoms of congestion (edema, orthopnea or paroxysmal dyspnea), ii) reduced cardiac output, resulting in fatigue or dyspnea on exertion, arrhythmias and/or conduction system disease and iii) thromboembolic disease or stroke, mainly from left ventricular mural thrombus. However, individuals with DCM may also be asymptomatic. The prevalence of idiopathic DCM is at least 1/2,700 in the general population.

 

Left ventricular non-compaction (LVNC) is characterized by abnormal trabeculations in the left ventricle, most frequently at the apex. Prominent trabeculations and deep intertrabecular recesses give the myocardium a sponge-like appearance that can be detected using echocardiogram. LVNC can share the same clinical presentation as DCM, ranging from asymptomatic disease to progressive deterioration of cardiac function, arrhythmias, thromboembolic events, or sudden cardiac death. LVNC is a rare condition, which affects less than 0.3% of the population. While DCM/LVNC can be an isolated finding, it can also occur in association with neuromuscular disorders or mitochondrial myopathy. In addition, DCM/LVNC can be a presenting feature of various genetic syndromes, including Danon disease, Carvajal Syndrome, Barth syndrome, or Emery-Dreifuss muscular dystrophy.

 

A genetic diagnosis may have implications for treatment, management, recurrence risk, and family member testing.