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Test Code LAB3257 Long QT Syndrome Panel

Additional Codes

LQTS Pnl

Clinical System Name

Long QT Syndrome Panel

Synonyms

Cardiac Channelopathy
Long QT
LQTS Sequencing

Andersen-Tawil syndrome

Jervell and Lange-Nielson syndrome

Description

Genetic testing panel for long QT syndrome analyzing 19 genes: AKAP9, ANK2, CACNA1C, CALM1, CALM2, CALM3, CAV3, KCNE1, KCNE2, KCNH2, KCNJ2, KCNJ5, KCNQ1, SCN4B, SCN5A, SNTA1, TANGO2, TECRL, TRDN

Sample Requirements

Specimen: Whole Blood

Container(s): Lavender Top/EDTA, Yellow/ACD

Preferred Vol: 5.0 mL

Minimum Vol: 3.0 mL (1.0 mL for small infants)

 

Specimen: DNA

Container(s): EDTA (Lavendar)/ACD (Yellow)

Preferred Vol: 5 µg -10 µg of purified DNA at a concentration of at least 100 ng/μL

 

Alternative Specimen (e.g. salvia or buccal): Alternate Specimen Collection Kits for Genetic Testing

Processing Instructions

Reject due to:

Spin: N

Aliquot: N

Temp: 2 - 8 C

Storage Location: Deliver blood to refrigerator, Send Outs rack.

 

Off-site Collection: Send whole blood refrigerated.

Stability

Specimen Type Temperature Time
Whole Blood Room temp 3 d
  Refrigerated 7 d
  Frozen Unacceptable
Extracted DNA Room temp 3-4 d
  Refrigerated 1 y
  Frozen Indefinitely

 

Availability

STAT TAT
N  3 - 4 weeks

 

Performing Laboratory

PreventionGenetics

3800 South Business Park Avenue

Marshfield, WI 54449

 

Phone Number: (715) 387-0484

Department

Department: Send Outs/Genetic

Phone Number: (206) 987-2563

 

Methodology

Next-generation sequencing with orthogonal methods (i.e., Sanger sequencing, array) as needed.

Reference Range

Interpretive report provided.
 

Special Instructions

PreventionGenetics

Clinical Utility

Long QT syndrome (LQTS) is characterized by QT prolongation and T wave abnormalities on electrocardiogram (EKG) that predisposes individuals to life-threatening arrhythmias. The condition manifests primarily through syncope, cardiac arrest, and sudden cardiac death, with symptoms often triggered by emotional or physical stress. Cardiac events are most common from the preteen years through the 20s, though they can occur from infancy through middle age. LQTS exhibits incomplete penetrance for EKG changes and symptoms, with some genetically affected individuals showing normal QTc intervals on baseline EKG. The prevalence is estimated at 1:2,500. LQTS is predominantly inherited in an autosomal dominant manner, with pathogenic variants in KCNQ1, KCNH2, and SCN5A accounting for most genetically confirmed cases. Some rare forms show autosomal recessive inheritance, including Jervell and Lange-Nielsen syndrome (associated with congenital deafness) and TRDN-related LQTS-catecholaminergic polymorphic ventricular tachycardia (CPVT) overlap syndrome. Both sequence variants and copy number variants have been reported as causative. The diagnostic yield of this panel will vary based on the clinical phenotype of the patient and is expected to be approximately 75%.

Send Out Instructions

Reference Test Name: Long QT Syndrome Panel
Reference Lab Test Code: 10325
Instructions: Ship Monday through Friday via FedEx Priority Overnight. Saturday deliveries are accepted.